Insertion junction: LMJ.RY0402.118882_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.118882
Chromosome:chromosome 9
Location:1746554
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396586 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAGGGGCGGTTGGGGGAGAATGGTTCC
Internal bar code:TCTTACGGTGGCGCACTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:11.5243
LEAP-Seq n confirming:691
LEAP-Seq n nonconfirming:5305
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGCTTGCAATTATACC
Suggested primer 2:CCCAAGCTTGAAAAGCTCAC