Insertion junction: LMJ.RY0402.118937_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.118937
Chromosome:chromosome 13
Location:751338
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g566650 LCS2 Long-chain acyl-CoA synthetase; (1 of 1) 2.7.8.11//6.2.1.3 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase // Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCAGGGTAAGAGGGGCAGGGTGAGGG
Internal bar code:GTCGAGTAACGCGCTACGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:77.6056
LEAP-Seq n confirming:551
LEAP-Seq n nonconfirming:159
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTTAGTTTGGGCAGGTA
Suggested primer 2:AACTGAACCAGACCCAATGC