Insertion junction: LMJ.RY0402.118972_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.118972
Chromosome:chromosome 7
Location:2704555
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g331050 (1 of 1) IPR000104//IPR001487 - Antifreeze protein, type I // Bromodomain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCCGAACTCGGTTGCGGACGTCGTCG
Internal bar code:CTGTATAGGGCGACAGGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:99.7301
LEAP-Seq n confirming:5542
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCACTGGTGTCCGTGGTA
Suggested primer 2:GACAGGCTGTAGGCCTTTTG