Insertion junction: LMJ.RY0402.119372_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.119372
Chromosome:chromosome 9
Location:3648651
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAGTCGCCACGACCACCGCCCCTTTGT
Internal bar code:GATGGACCATGAATGTCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1098
LEAP-Seq percent confirming:99.752
LEAP-Seq n confirming:2413
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCCGAAGGGTATGTAG
Suggested primer 2:GGTTGGAGCGTGTATGGAGT