Insertion junction: LMJ.RY0402.119607_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.119607
Chromosome:chromosome 11
Location:2065243
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g468750 CPLD48 Conserved in the Plant Lineage and Diatoms; (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCCTGCGCCGTAGTCGATGATGCCCA
Internal bar code:TTGGTTTCGACACTCAGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCAACTTGTGAGTCCA
Suggested primer 2:CCCCGCCTCTTTTACTCTTC