Insertion junction: LMJ.RY0402.119754_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.119754
Chromosome:chromosome 10
Location:4582210
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g452550 HOPP1,HOP1 Homologous-pairing protein 1; (1 of 3) PF02301 - HORMA domain (HORMA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACGAGGGAGCAAGTGAGCGCTTTCGGT
Internal bar code:ACATACCGGCGGGCATGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:989
LEAP-Seq percent confirming:99.8735
LEAP-Seq n confirming:3157
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAAGAGCAAGCATACC
Suggested primer 2:TTCTTTGTTGCTGTTGCTGG