Insertion junction: LMJ.RY0402.119776_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.119776
Chromosome:chromosome 10
Location:3038226
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGCACGCCACCGGCCACCAAGCGGC
Internal bar code:TGCGTTGGGCGCCTCAAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1018
LEAP-Seq percent confirming:98.6816
LEAP-Seq n confirming:1497
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCCCTGTTCACATTCGC
Suggested primer 2:AGTGCAGCGGCTTTATTCAT