Insertion junction: LMJ.RY0402.119809_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.119809
Chromosome:chromosome 3
Location:2642097
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGAGTGGCTTGATTCTGGGATGAGCG
Internal bar code:GATGTGCCGACTCTGACGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:98.359
LEAP-Seq n confirming:11388
LEAP-Seq n nonconfirming:190
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCACCCTGATCTGCTCT
Suggested primer 2:AGTGGTGCACGTAGCAGATG