Insertion junction: LMJ.RY0402.120202_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.120202
Chromosome:chromosome 7
Location:5882569
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g353837 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACTGCGCGCCAATGTAAAGCACAAGGT
Internal bar code:GTAATTACGGCGCGTGGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:205
LEAP-Seq percent confirming:99.1223
LEAP-Seq n confirming:1581
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTAAGGCATGTGCTTG
Suggested primer 2:GCACTCTACGCACACCTTGA