Insertion junction: LMJ.RY0402.120225_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.120225
Chromosome:chromosome 12
Location:5590413
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g531900 FLVA,FLVA1 (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGTAGCAATTGCAGGCGGTTGGATCTC
Internal bar code:ACTAGGAGATTGCGAAAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:818
LEAP-Seq percent confirming:87.2618
LEAP-Seq n confirming:1603
LEAP-Seq n nonconfirming:234
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCTACGCCTTCACTTT
Suggested primer 2:GGGCAGAACTCTCGACACTC