Insertion junction: LMJ.RY0402.120485_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.120485
Chromosome:chromosome 13
Location:2407843
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGAACCTGAACCCCCGCTCTTCAACCA
Internal bar code:CTAAGGGAAGAATGAGTGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:99.6972
LEAP-Seq n confirming:3622
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTACGGCAGTTGCAGTGT
Suggested primer 2:GGTAGCGACATGTTCCTGGT