Insertion junction: LMJ.RY0402.120485_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.120485
Chromosome:chromosome 13
Location:2407844
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGTGTGCGTTGACCTTTGCAGCAGTGG
Internal bar code:AGTCGTGGGGTGACAGCGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:99.6728
LEAP-Seq n confirming:1523
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTACGGCAGTTGCAGTGT
Suggested primer 2:GGTAGCGACATGTTCCTGGT