Insertion junction: LMJ.RY0402.120514_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.120514
Chromosome:chromosome 10
Location:3225817
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g442850 TOP1A Topoisomerase type IA, chlloroplast-targeted; (1 of 1) K03168 - DNA topoisomerase I [EC:5.99.1.2] (topA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCACCCGCAGCTACTGACGAGGACTG
Internal bar code:AACGCGAAAAGGTCAGTCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TACCATATGCGTGAATGCGT
Suggested primer 2:ACGTACTCCTGAATCCACCG