Insertion junction: LMJ.RY0402.120549_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.120549
Chromosome:chromosome 17
Location:1489910
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g707050 UAF5,SPL12 U2 snRNP auxiliary factor associated protein; (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACCCTCTTGCTTTGACTTTCTGCGTAT
Internal bar code:CTGGCCGGCCACCAGTAAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:99.5283
LEAP-Seq n confirming:211
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTGCAGCCCAAGGAGAG
Suggested primer 2:TGTGAAGTGAGCCATTCGTC