Insertion junction: LMJ.RY0402.120549_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.120549
Chromosome:chromosome 17
Location:1489917
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g707050 UAF5,SPL12 U2 snRNP auxiliary factor associated protein; (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCCCCACGGCCCCAGGACCATCTCGTC
Internal bar code:CGCTGTGCTGTTTAGACAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:73
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCTCACAACGCTGCCTCT
Suggested primer 2:CTACCGTGACAACTGGCTGA