Insertion junction: LMJ.RY0402.120630_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.120630
Chromosome:chromosome 9
Location:4763284
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGCGAGCGCAGGCAACCTGGCGGCAG
Internal bar code:TCTTAGGGCCCGTTACATGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:99.8387
LEAP-Seq n confirming:5571
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAGTTGCACTAGTGTGT
Suggested primer 2:CGGTGATTGACGGTGTAATG