Insertion junction: LMJ.RY0402.121066_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.121066
Chromosome:chromosome 17
Location:4044911
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTATCAAGTACCAGCCGGGGACTGAACA
Internal bar code:GGTCCGCCGTCAAGCATATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:99.633
LEAP-Seq n confirming:1086
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGATGGTGGAGGAG
Suggested primer 2:CAGCTGGGATACCTACTCGC