Insertion junction: LMJ.RY0402.121236_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.121236
Chromosome:chromosome 9
Location:4684868
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g396883 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAATCCGGTTAGCAGCCCGCAGCCACA
Internal bar code:TGTTACTGGTCAGTGGCCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:238
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCGCATTCACTAGCAA
Suggested primer 2:GTATGTTGTAGGGCGGTGCT