Insertion junction: LMJ.RY0402.121371_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.121371
Chromosome:chromosome 10
Location:6480604
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g466350 CDPK2,SNRK2H (1 of 1) PTHR24343:SF169 - SERINE/THREONINE-PROTEIN KINASE SRK2D-RELATED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCATGTGCATTTGCATCTGCTGCTGC
Internal bar code:TAATCGGATCCAATAATGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTATCGCGGAGTCAGTGT
Suggested primer 2:CAGGACCCCAACAACTTCAG