Insertion junction: LMJ.RY0402.121446_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.121446
Chromosome:chromosome 17
Location:5710348
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g738850 (1 of 1) IPR000104//IPR003169 - Antifreeze protein, type I // GYF domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTCAGGGGACCGTTGGCCATGGCAACC
Internal bar code:GTCTCCCCCACGGACCTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:99.6732
LEAP-Seq n confirming:2135
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTACACACGCATGCACACAC
Suggested primer 2:CCAAGTCAAACTAGCGGAGC