Insertion junction: LMJ.RY0402.121457_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.121457
Chromosome:chromosome 4
Location:2775102
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g223750 (1 of 1) IPR000048//IPR009071//IPR027417 - IQ motif, EF-hand binding site // High mobility group box domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTACACTTACAGGAGCGGCGAGCGGTCC
Internal bar code:CGGTCGATTCTGGGGAATGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:648
LEAP-Seq percent confirming:80.1509
LEAP-Seq n confirming:1700
LEAP-Seq n nonconfirming:421
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCGTAATCCTGCAATCC
Suggested primer 2:ATACATGCCGACACACCTGA