Insertion junction: LMJ.RY0402.121609_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.121609
Chromosome:chromosome 12
Location:8403717
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g548700 3'UTR|outside_mRNA
Cre12.g548750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAACTGGCCCCTCCTGAGTGGACGTCT
Internal bar code:CACCTGGTTGTTTCCCTGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:99.7155
LEAP-Seq n confirming:2804
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TAACGCATGCTTGCTTTCAC
Suggested primer 2:TTCCCACTGAGTTCGCTTCT