Insertion junction: LMJ.RY0402.121632_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.121632
Chromosome:chromosome 11
Location:3210778
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g479500 PRPL4 (1 of 1) PTHR10746//PTHR10746:SF10 - 50S RIBOSOMAL PROTEIN L4 // 50S RIBOSOMAL PROTEIN L4, CHLOROPLASTIC; Chloroplast ribosomal protein L4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCGCAATACAACTGCATACATCCGCCG
Internal bar code:TGATATGGTGGATGTGCGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:99.9553
LEAP-Seq n confirming:4474
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGAAGGAGCAGGTGTGA
Suggested primer 2:GTTGTCGGCGATTTTGTTTT