Insertion junction: LMJ.RY0402.121721_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.121721
Chromosome:chromosome 6
Location:7597161
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g301100 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCGGAACTGGTGTTAGCTCAGCTGCT
Internal bar code:TGAATAATCTAGTGGGAAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:99.6175
LEAP-Seq n confirming:3386
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTGTGGGTATGGTTCA
Suggested primer 2:CAGCTAGTTCTGCTTTGGGG