Insertion junction: LMJ.RY0402.121785_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.121785
Chromosome:chromosome 3
Location:8139182
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200650 CHI2 (1 of 1) K17525 - chitinase domain-containing protein 1 (CHID1); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGGTACAGGTTTCGGGGGTTGGCATTG
Internal bar code:CGTATTATGAACAATCATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTTCTGTGTGTGTCCG
Suggested primer 2:CTGCCTTGTCGGGATACATT