Insertion junction: LMJ.RY0402.122049_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.122049
Chromosome:chromosome 2
Location:3257220
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g095079 (1 of 2) IPR000104//IPR011705 - Antifreeze protein, type I // BTB/Kelch-associated CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCAGCATCAGCGGCGCCTCGCCCGTAA
Internal bar code:TGGATACTGGGGTCGGTCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:777
LEAP-Seq percent confirming:90.2778
LEAP-Seq n confirming:780
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGAAGAACAAGTCGCCC
Suggested primer 2:GTCATAGCCGGTGTCTGGTT