Insertion junction: LMJ.RY0402.122136_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.122136
Chromosome:chromosome 6
Location:4068014
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTGCTCCATAGACGCAGCCAGCCGCG
Internal bar code:TTCCATACGGCGGGGCACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:423
LEAP-Seq percent confirming:99.533
LEAP-Seq n confirming:1918
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGAGTTCGTGCACTTC
Suggested primer 2:TCGGCTAAGCTTTCAATCGT