Insertion junction: LMJ.RY0402.122149_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.122149
Chromosome:chromosome 11
Location:1413327
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467723 KAS1 (1 of 1) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC; 3-ketoacyl-ACP-synthase 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCAAACTCCCCCCGTACCAGTTCCAAA
Internal bar code:CATCTGAGAGCCGGCTGGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:99.5366
LEAP-Seq n confirming:1074
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGGGCTGTGTAGCTC
Suggested primer 2:GTCATATCCGCTGATCCGTT