Insertion junction: LMJ.RY0402.122384_5

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.122384
Chromosome:chromosome 12
Location:5734579
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g532950 (1 of 4) PF00060//PF00497 - Ligand-gated ion channel (Lig_chan) // Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3); Ligand-gated ion channel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGGGTATCTTTATCCCACCGATACCGG
Internal bar code:CTGGATTGGGGTCGCTGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:99.4693
LEAP-Seq n confirming:6373
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACAAAATGGGTACTGCT
Suggested primer 2:CAATCAAGCAAACAGCAGGA