Insertion junction: LMJ.RY0402.122558_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.122558
Chromosome:chromosome 3
Location:7434312
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGGCAGACAAGCGCGAAGCAGCTGTCA
Internal bar code:CGCAGCCGATCCCCGAGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGACTAAAGGCGAATTGA
Suggested primer 2:GCAACCTCTGGCAAGACTTC