Insertion junction: LMJ.RY0402.122832_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.122832
Chromosome:chromosome 16
Location:2612990
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g661700 (1 of 1) PTHR31775//PTHR31775:SF2 - FAMILY NOT NAMED // REMORIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCACGCACACGCGCGCCAAAATTGTA
Internal bar code:GTCGCGGGCAAGCGATACGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:99.5152
LEAP-Seq n confirming:2463
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACATATGGCCCTGGCTACAG
Suggested primer 2:ATTGTTACGCTGGCCTTGAC