Insertion junction: LMJ.RY0402.122949_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.122949
Chromosome:chromosome 4
Location:3738733
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g229374 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTCCAAGCCTGAAGCGTTTCCACAGA
Internal bar code:ATAATTGACGGGTCCGGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGAGCGCTATGTCAAA
Suggested primer 2:GTGACTACGGTTTCCACGGT