Insertion junction: LMJ.RY0402.123019_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.123019
Chromosome:chromosome 17
Location:1409099
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g706450 LIC3 (1 of 1) IPR000104//IPR006029//IPR006201//IPR006202 - Antifreeze protein, type I // Neurotransmitter-gated ion-channel transmembrane domain // Neurotransmitter-gated ion-channel // Neurotransmitter-gated ion-channel ligand-binding domain; Ligand-gated ion channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACCCCACCCACCGCCACCACCAAGGCA
Internal bar code:CTAATGACCTATGGTTGGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:1.35135
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:146
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATCGTGTTGACGTCGTG
Suggested primer 2:ACCTCTCCCTACCCCTCTCA