Insertion junction: LMJ.RY0402.123047_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.123047
Chromosome:chromosome 16
Location:5870162
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g677550 CYA15 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1); Solute-binding protein-like adenylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGGCACACCCTCCGATGGCGTGTCGCC
Internal bar code:TTTGATGAAGTAACGTTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:79.2773
LEAP-Seq n confirming:2479
LEAP-Seq n nonconfirming:648
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAGACGTTGGAGGTGAC
Suggested primer 2:ATATCGCTGGATACAACGCC