Insertion junction: LMJ.RY0402.123106_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.123106
Chromosome:chromosome 9
Location:4713453
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397031 (1 of 6) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTATCGAGGTATCGGGGACAGCTGACA
Internal bar code:CCCATAAGGTGTGGGCGAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:62.1735
LEAP-Seq n confirming:1476
LEAP-Seq n nonconfirming:898
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTCTGCTGATGTGTGCT
Suggested primer 2:CACCGACAATCCAATCACTG