Insertion junction: LMJ.RY0402.123115_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.123115
Chromosome:chromosome 9
Location:1239675
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTAGAAAGAGGCGTGTGCGGGGCTGCC
Internal bar code:GGTGAAGAGCAATCGGCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:55.4726
LEAP-Seq n confirming:223
LEAP-Seq n nonconfirming:179
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGTATTGTGCCTGACT
Suggested primer 2:ACCCTGTCACAGATCCGTTC