Insertion junction: LMJ.RY0402.123180_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.123180
Chromosome:chromosome 4
Location:3194396
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g226200 (1 of 3) IPR000938 - CAP Gly-rich domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTAGCATCATATTGCCACCCAACCAT
Internal bar code:AGGGTTTAACGGGTCCCTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:99.0719
LEAP-Seq n confirming:427
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCTGTCCTCCTCCCT
Suggested primer 2:ACCGTACTCCACTGCAGCTT