Insertion junction: LMJ.RY0402.123180_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.123180
Chromosome:chromosome 4
Location:3194414
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g226200 (1 of 3) IPR000938 - CAP Gly-rich domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGGTGGAGATGGGCCGGACTTAGCAG
Internal bar code:GCAAAAGTCAAAGTTGGCCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:513
LEAP-Seq percent confirming:98.5045
LEAP-Seq n confirming:3491
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCTGTCCTCCTCCCT
Suggested primer 2:ACCGTACTCCACTGCAGCTT