Insertion junction: LMJ.RY0402.123224_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.123224
Chromosome:chromosome 3
Location:2268153
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCCATGGCTACGCCATGCAGAAATGCC
Internal bar code:TATCTCTCATGAAGACAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:99.6341
LEAP-Seq n confirming:2451
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGACCCTCCTGGTCTG
Suggested primer 2:CAACCTGCACAACTGCTGAT