Insertion junction: LMJ.RY0402.123246_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.123246
Chromosome:chromosome 10
Location:362441
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTGTTTTAAGCTCTGGGGTGACTTGCC
Internal bar code:GAGAGGACCGCCTAGCCAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1400
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTCATGCATACGGAGCC
Suggested primer 2:TCGCAGCCACTTTTGTATTG