Insertion junction: LMJ.RY0402.123330_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.123330
Chromosome:chromosome 1
Location:245102
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g001600 Predicted protein containing BTB/POZ fold domain (involved in protein binding); (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTTAGCGACGTGCACACGAATATGCAA
Internal bar code:GGTAAAACGTGCCATGCGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:888
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAACACTTTCCACACCG
Suggested primer 2:ACATGGTACAAGGCGAGGTC