Insertion junction: LMJ.RY0402.123412_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.123412
Chromosome:chromosome 10
Location:346906
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g420450 (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAATCAACACGTGCCGATTGGGCTGGGC
Internal bar code:GAGCCGTTCCCTCATGGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:99.8664
LEAP-Seq n confirming:2991
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGAAAACTCCCATCAT
Suggested primer 2:TGTTCATTTGCTGGCTTGAG