Insertion junction: LMJ.RY0402.123637_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.123637
Chromosome:chromosome 1
Location:3987307
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g025950 PPR8 (1 of 1) IPR000209//IPR002885 - Peptidase S8/S53 domain // Pentatricopeptide repeat; PentatricoPeptide Repeat protein 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCAAGTGATGTGGCTTCAGGCATGAAA
Internal bar code:GGTCGATCGTGTGTATGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:99.8525
LEAP-Seq n confirming:2708
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATAACGCTTTGGTCGTTTGG
Suggested primer 2:AACGGCAGCTGCTTAGTGAT