Insertion junction: LMJ.RY0402.123956_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.123956
Chromosome:chromosome 17
Location:1410838
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g706450 LIC3 (1 of 1) IPR000104//IPR006029//IPR006201//IPR006202 - Antifreeze protein, type I // Neurotransmitter-gated ion-channel transmembrane domain // Neurotransmitter-gated ion-channel // Neurotransmitter-gated ion-channel ligand-binding domain; Ligand-gated ion channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCTGCTTAGCAGCGGCTGCTGCGATAG
Internal bar code:TCTTGCTGTGGAAGTGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:252
LEAP-Seq percent confirming:66.3155
LEAP-Seq n confirming:6168
LEAP-Seq n nonconfirming:3133
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGACGGATTTCTTCTTTG
Suggested primer 2:AAAGGGGTAAGCACGGAAGT