Insertion junction: LMJ.RY0402.123959_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.123959
Chromosome:chromosome 2
Location:4265726
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATGCTTGTAGTAGCAACAAGCAAGCTT
Internal bar code:TCAACAAACATAAGCCACCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:676
LEAP-Seq percent confirming:95.1735
LEAP-Seq n confirming:631
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAGGGCTCTGTTCTGCT
Suggested primer 2:AGCCTGTCGGTAATGGTCAC