Insertion junction: LMJ.RY0402.123998_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.123998
Chromosome:chromosome 17
Location:1489813
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g707050 UAF5,SPL12 U2 snRNP auxiliary factor associated protein; (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCGCCAAGCTCGACGCACGTACACAG
Internal bar code:GGGGTCTTTCAACAGCACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:356
LEAP-Seq percent confirming:72.0695
LEAP-Seq n confirming:498
LEAP-Seq n nonconfirming:193
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGCGTAGACATCAGCAC
Suggested primer 2:GTACTGCAGCCCAAGGAGAG