Insertion junction: LMJ.RY0402.124435_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.124435
Chromosome:chromosome 5
Location:3165864
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239500 FAP38 (1 of 1) IPR000104//IPR009068 - Antifreeze protein, type I // S15/NS1, RNA-binding; Flagellar Associated Protein 38 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCAAGCTGCACCCTACGGGACTTCAC
Internal bar code:GCACGTCCAGTCGTTTGGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:99.652
LEAP-Seq n confirming:2577
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGACAAGGGGAGGGTAG
Suggested primer 2:GCTTGAACATGTGCTCCTCA