Insertion junction: LMJ.RY0402.124892_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.124892
Chromosome:chromosome 7
Location:4164158
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g342450 SEE3 Putative splicing endonuclease positive effector; (1 of 3) K10706 - senataxin [EC:3.6.4.-] (SETX, ALS4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGACGGCGGAGGGGTTGCAGAGTTGT
Internal bar code:ACTGATATGGTTTTCATGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:99.4769
LEAP-Seq n confirming:5895
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATCAGTTCCAACGAGCC
Suggested primer 2:AGCAACAGTTGGGAGTGCTT