Insertion junction: LMJ.RY0402.125168_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.125168
Chromosome:chromosome 1
Location:795983
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g004124 (1 of 3) 3.2.1.8 - Endo-1,4-beta-xylanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCACCGTCCTGTGTGCAGCCCATGTAA
Internal bar code:CCGTGGTGATCCTCGCATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:869
LEAP-Seq percent confirming:99.4425
LEAP-Seq n confirming:2854
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGATGCCCTCGTTGAG
Suggested primer 2:GGCTTTGGCTAGCTTGTTTG