Insertion junction: LMJ.RY0402.125491_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.125491
Chromosome:chromosome 6
Location:3766679
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACATTGACTCTGGTGCCGTTCCTCTGC
Internal bar code:CCCTCCCTCGACTCGCGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:96
LEAP-Seq percent confirming:99.6071
LEAP-Seq n confirming:507
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGTCTTACCTGGTAGC
Suggested primer 2:GTGAGGGTATTCGGACCTCA